UNIX Command-Line Intro


Please, install Virtual Box and the Linux virtual machine we created for this course in your laptop. You will find all the information you need in this link.

Topics covered

Class I

  • Terminal file system navigation
  • Wildcards, shortcuts and special characters
  • File permissions
  • Compression UNIX commands
  • Networking UNIX commands

Class II

  • Basic NGS file formats
  • Text files manipulation commands
  • Command-line pipelines
  • Introduction to bash scripts


Estimated Time

  • Lecture and exercises: 2:00 h


Class I

Class II


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