Introduction to R

Prerequisites

  • Data sets from the previous session “Mapping NGS Data.”  We can provide this on a flash drive at the beginning of the course if you missed the previous session or were unable to complete the exercises.

Topics covered

  • Brief introduction to R
  • Analysis of RNA-seq data to detect differentially expressed genes using the cummeRbund package.
  • Quality control of RNA-seq

Estimated Time

  • Lecture and examples: 2:00 h

Materials

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